Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | VS-05 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-05 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408233 bp
Thymine Count
411806 bp
Guanine Count
324856 bp
Cytosine Count
322319 bp
Genome Length
1467214 bp
Protein-coding Genes
1282 genes
Non-Coding Genes
10 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ydcf family protein | VSVS05_RS14990 | Not Available | Positive | 110978 - 111928 | 34776.8 |
| duf333 domain-containing protein | VSVS05_RS14995 | Not Available | Negative | 111945 - 112223 | 10219.9 |
| ggdef domain-containing protein | VSVS05_RS15000 | Not Available | Negative | 112317 - 113333 | 38534.6 |
| chemotaxis protein | VSVS05_RS15005 | Not Available | Negative | 113563 - 114489 | 34245.5 |
| peptidylprolyl isomerase ppic | VSVS05_RS15010 | Not Available | Positive | 114681 - 114959 | 10228.6 |
| lpxl/lpxp family kdo(2)-lipid iv(a) lauroyl/palmitoleoyl acyltransferase | VSVS05_RS15015 | Not Available | Negative | 115045 - 115977 | 35427.9 |
| cytochrome c | VSVS05_RS15020 | Not Available | Negative | 116093 - 116413 | 11744.2 |
| low-specificity l-threonine aldolase | VSVS05_RS15025 | Not Available | Negative | 116566 - 117570 | 36115.1 |
| nudix hydrolase | VSVS05_RS15030 | Not Available | Negative | 117605 - 118135 | 19565.6 |
| atpase rava domain-containing protein | VSVS05_RS15035 | Not Available | Positive | 118396 - 120060 | 62699.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
