Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | VS-05 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-05 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408233 bp
Thymine Count
411806 bp
Guanine Count
324856 bp
Cytosine Count
322319 bp
Genome Length
1467214 bp
Protein-coding Genes
1282 genes
Non-Coding Genes
10 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator | VSVS05_RS14890 | Not Available | Negative | 88919 - 90532 | 60448.8 |
| cation diffusion facilitator family transporter | VSVS05_RS14895 | Not Available | Negative | 90757 - 91650 | 32733.7 |
| lysr family transcriptional regulator | VSVS05_RS14900 | Not Available | Negative | 91888 - 92766 | 32914.4 |
| class i sam-dependent methyltransferase | VSVS05_RS14905 | Not Available | Positive | 92903 - 93484 | 20967.9 |
| acetoacetate--coa ligase | VSVS05_RS14910 | Not Available | Negative | 93513 - 95579 | 77059.3 |
| phenylalanine 4-monooxygenase | VSVS05_RS14915 | Not Available | Positive | 95905 - 96699 | 30379.3 |
| 4a-hydroxytetrahydrobiopterin dehydratase | VSVS05_RS14920 | Not Available | Positive | 96689 - 97051 | 13924.3 |
| sh3 domain-containing protein | VSVS05_RS14925 | Not Available | Positive | 97298 - 97951 | 24774.4 |
| pyrimidine 5'-nucleotidase | VSVS05_RS14930 | Not Available | Positive | 98105 - 98788 | 25403.4 |
| nitrite reductase large subunit nirb | VSVS05_RS14935 | Not Available | Positive | 99110 - 101683 | 93931.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
