Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | VS-05 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-05 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408233 bp
Thymine Count
411806 bp
Guanine Count
324856 bp
Cytosine Count
322319 bp
Genome Length
1467214 bp
Protein-coding Genes
1282 genes
Non-Coding Genes
10 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar phosphate nucleotidyltransferase | VSVS05_RS14840 | Not Available | Positive | 77460 - 78581 | 41057.2 |
| atp-binding protein | VSVS05_RS14845 | Not Available | Positive | 78602 - 79081 | 17941.2 |
| glycosyltransferase | VSVS05_RS14850 | Not Available | Positive | 79131 - 80990 | 71869.0 |
| duf3131 domain-containing protein | VSVS05_RS14855 | Not Available | Positive | 80980 - 82299 | 49675.7 |
| duf3131 domain-containing protein | VSVS05_RS14860 | Not Available | Positive | 82320 - 83720 | 53486.0 |
| duf3131 domain-containing protein | VSVS05_RS14865 | Not Available | Positive | 83732 - 85114 | 52412.9 |
| hypothetical protein | VSVS05_RS14870 | Not Available | Positive | 85111 - 86097 | 35842.1 |
| family 16 glycosylhydrolase | VSVS05_RS14875 | Not Available | Positive | 86263 - 86979 | 27819.2 |
| glycosyltransferase | VSVS05_RS14880 | Not Available | Positive | 87117 - 88397 | 47251.9 |
| hypothetical protein | VSVS05_RS14885 | Not Available | Negative | 88507 - 88707 | 7819.27 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
