Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | VS-05 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-05 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408233 bp
Thymine Count
411806 bp
Guanine Count
324856 bp
Cytosine Count
322319 bp
Genome Length
1467214 bp
Protein-coding Genes
1282 genes
Non-Coding Genes
10 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| start domain-containing protein | VSVS05_RS14640 | Not Available | Negative | 15466 - 16074 | 23007.1 |
| m14 family metallocarboxypeptidase | VSVS05_RS14645 | Not Available | Negative | 16323 - 17249 | 33839.4 |
| alpha-amylase family protein | VSVS05_RS14650 | Not Available | Positive | 17534 - 18889 | 51118.6 |
| arac family transcriptional regulator | VSVS05_RS14655 | Not Available | Negative | 18944 - 19546 | 22463.2 |
| 1-acyl-sn-glycerol-3-phosphate acyltransferase | VSVS05_RS14660 | Not Available | Positive | 19736 - 20839 | 41474.6 |
| hypothetical protein | VSVS05_RS14665 | Not Available | Negative | 20978 - 21586 | 21785.6 |
| yfcz/yiis family protein | VSVS05_RS14670 | Not Available | Negative | 21700 - 21996 | 10813.8 |
| tetr/acrr family transcriptional regulator | VSVS05_RS14675 | Not Available | Positive | 22500 - 22961 | 17461.9 |
| response regulator | VSVS05_RS14680 | Not Available | Positive | 23142 - 24152 | 36730.6 |
| pas domain-containing protein | VSVS05_RS14685 | Not Available | Positive | 24152 - 24586 | 16867.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
