Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas piscicida |
| Strain | DE1-A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Delaware Bay; Hainan Island; mariculture water; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoalteromonas piscicida strain DE1-A chromosome 1, complete
Gene Summary
Adenine Count
1174966 bp
Thymine Count
1179793 bp
Guanine Count
903423 bp
Cytosine Count
907796 bp
Genome Length
4165978 bp
Protein-coding Genes
3589 genes
Non-Coding Genes
211 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5-formyltetrahydrofolate cyclo-ligase | D0N37_RS04295 | Not Available | Negative | 919134 - 919778 | 23992.9 |
| hypothetical protein | D0N37_RS04300 | Not Available | Negative | 919775 - 920308 | 19916.7 |
| s10 family peptidase | D0N37_RS04305 | Not Available | Negative | 920448 - 921959 | 57355.0 |
| diguanylate cyclase domain-containing protein | D0N37_RS04310 | Not Available | Positive | 922236 - 923465 | 46436.4 |
| p-ii family nitrogen regulator | D0N37_RS04315 | Not Available | Positive | 923655 - 923993 | 12517.2 |
| ammonium transporter | D0N37_RS04320 | Not Available | Positive | 924007 - 925236 | 42801.5 |
| penicillin-binding protein 1b | D0N37_RS04325 | Not Available | Positive | 925404 - 927725 | 87448.4 |
| glutamate-1-semialdehyde 2,1-aminomutase | D0N37_RS04330 | Not Available | Negative | 927882 - 929162 | 45595.9 |
| aspartate carbamoyltransferase | D0N37_RS04335 | Not Available | Negative | 929175 - 930191 | 37508.6 |
| copd family protein | D0N37_RS04340 | Not Available | Negative | 930316 - 930750 | 17301.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.