Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas piscicida |
| Strain | DE1-A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Delaware Bay; Hainan Island; mariculture water; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoalteromonas piscicida strain DE1-A chromosome 1, complete
Gene Summary
Adenine Count
1174966 bp
Thymine Count
1179793 bp
Guanine Count
903423 bp
Cytosine Count
907796 bp
Genome Length
4165978 bp
Protein-coding Genes
3589 genes
Non-Coding Genes
211 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D0N37_RS24385 | Not Available | Negative | 909137 - 909313 | 6788.18 |
| integrase core domain-containing protein | D0N37_RS04250 | Not Available | Positive | 910144 - 911096 | 35559.6 |
| abc transporter permease | D0N37_RS04255 | Not Available | Positive | 911096 - 912727 | 61238.5 |
| abc transporter atp-binding protein | D0N37_RS04260 | Not Available | Positive | 912727 - 913758 | 38185.2 |
| dyp-type peroxidase | D0N37_RS04265 | Not Available | Positive | 913789 - 914703 | 34082.3 |
| hypothetical protein | D0N37_RS24595 | Not Available | Negative | 915042 - 915209 | 6189.38 |
| transcriptional regulator argr | D0N37_RS04275 | Not Available | Negative | 915427 - 915894 | 16936.7 |
| malate dehydrogenase | D0N37_RS04280 | Not Available | Positive | 916136 - 917068 | 32007.8 |
| phosphoglycerate dehydrogenase | D0N37_RS04285 | Not Available | Negative | 917151 - 918380 | 44600.5 |
| ribose-5-phosphate isomerase rpia | D0N37_RS04290 | Not Available | Negative | 918392 - 919045 | 22863.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.