Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas piscicida |
| Strain | DE1-A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Delaware Bay; Hainan Island; mariculture water; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoalteromonas piscicida strain DE1-A chromosome 1, complete
Gene Summary
Adenine Count
1174966 bp
Thymine Count
1179793 bp
Guanine Count
903423 bp
Cytosine Count
907796 bp
Genome Length
4165978 bp
Protein-coding Genes
3589 genes
Non-Coding Genes
211 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phoh family protein | D0N37_RS04195 | Not Available | Positive | 896751 - 898151 | 52065.5 |
| response regulator | D0N37_RS04200 | Not Available | Positive | 898220 - 901915 | 138413.0 |
| diguanylate cyclase domain-containing protein | D0N37_RS04205 | Not Available | Positive | 901925 - 902827 | 32926.9 |
| duf3192 domain-containing protein | D0N37_RS04210 | Not Available | Negative | 902895 - 903275 | 13986.5 |
| d-2-hydroxyacid dehydrogenase | D0N37_RS04215 | Not Available | Negative | 903473 - 904420 | 33762.6 |
| zn(2+)-responsive transcriptional regulator | D0N37_RS04220 | Not Available | Positive | 904512 - 904919 | 15404.6 |
| so_0444 family cu/zn efflux transporter | D0N37_RS04225 | Not Available | Positive | 904912 - 906186 | 44289.7 |
| integrase core domain-containing protein | D0N37_RS04230 | Not Available | Positive | 906354 - 907447 | 40404.0 |
| gnat family n-acetyltransferase | D0N37_RS04235 | Not Available | Negative | 907499 - 908041 | 20492.7 |
| pp_00796 | D0N37_RS04240 | Not Available | Positive | 908181 - 908846 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.