Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas piscicida |
| Strain | DE1-A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Delaware Bay; Hainan Island; mariculture water; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoalteromonas piscicida strain DE1-A chromosome 1, complete
Gene Summary
Adenine Count
1174966 bp
Thymine Count
1179793 bp
Guanine Count
903423 bp
Cytosine Count
907796 bp
Genome Length
4165978 bp
Protein-coding Genes
3589 genes
Non-Coding Genes
211 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | D0N37_RS04150 | Not Available | Positive | 886952 - 887260 | 11746.1 |
| dna gyrase inhibitor yacg | D0N37_RS04155 | Not Available | Negative | 887342 - 887584 | 9024.5 |
| integrase core domain-containing protein | D0N37_RS04160 | Not Available | Positive | 887739 - 889531 | 66674.0 |
| sensor histidine kinase | D0N37_RS24590 | Not Available | Positive | 889547 - 890068 | 19297.1 |
| response regulator | D0N37_RS04165 | Not Available | Positive | 890147 - 890596 | 16810.3 |
| l-cystine transporter | D0N37_RS04170 | Not Available | Negative | 890649 - 892007 | 47183.1 |
| Ncrna_class:other | Not Available | Not Available | Positive | 892424 - 892606 | Not Available |
| pseudouridine synthase | D0N37_RS04180 | Not Available | Negative | 892803 - 893393 | 21949.0 |
| rna polymerase-associated protein rapa | D0N37_RS04185 | Not Available | Negative | 893559 - 896456 | 109449.0 |
| hypothetical protein | D0N37_RS04190 | Not Available | Positive | 896455 - 896592 | 5331.45 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.