Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas piscicida |
| Strain | DE1-A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Delaware Bay; Hainan Island; mariculture water; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoalteromonas piscicida strain DE1-A chromosome 1, complete
Gene Summary
Adenine Count
1174966 bp
Thymine Count
1179793 bp
Guanine Count
903423 bp
Cytosine Count
907796 bp
Genome Length
4165978 bp
Protein-coding Genes
3589 genes
Non-Coding Genes
211 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycerophosphodiester phosphodiesterase family protein | D0N37_RS04095 | Not Available | Negative | 878027 - 879244 | 45097.2 |
| sulfate transporter cysz | D0N37_RS04100 | Not Available | Negative | 879325 - 880050 | 28369.2 |
| hypothetical protein | D0N37_RS04105 | Not Available | Positive | 880306 - 880581 | 9888.82 |
| cbs domain-containing protein | D0N37_RS04110 | Not Available | Positive | 880629 - 881222 | 22038.6 |
| trna (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-o)- methyltransferase trml | D0N37_RS04115 | Not Available | Negative | 881326 - 881790 | 17671.1 |
| cation diffusion facilitator family transporter | D0N37_RS04120 | Not Available | Positive | 882096 - 882941 | 30591.2 |
| alpha/beta fold hydrolase | D0N37_RS04125 | Not Available | Negative | 882893 - 883855 | 36412.1 |
| atp-binding protein | D0N37_RS04130 | Not Available | Negative | 883858 - 885219 | 51010.4 |
| response regulator | D0N37_RS04135 | Not Available | Negative | 885223 - 885909 | 25845.4 |
| spy/cpxp family protein refolding chaperone | D0N37_RS04140 | Not Available | Positive | 886117 - 886578 | 17220.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.