Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas piscicida |
| Strain | DE1-A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Delaware Bay; Hainan Island; mariculture water; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoalteromonas piscicida strain DE1-A chromosome 1, complete
Gene Summary
Adenine Count
1174966 bp
Thymine Count
1179793 bp
Guanine Count
903423 bp
Cytosine Count
907796 bp
Genome Length
4165978 bp
Protein-coding Genes
3589 genes
Non-Coding Genes
211 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| citrulline utilization hydrolase ctlx | D0N37_RS03835 | Not Available | Positive | 816826 - 817755 | 34754.7 |
| alanine/glycine:cation symporter family protein | D0N37_RS03840 | Not Available | Positive | 817859 - 819289 | 50701.3 |
| tigr04211 family sh3 domain-containing protein | D0N37_RS03845 | Not Available | Negative | 819409 - 820020 | 22722.0 |
| cyth domain-containing protein | D0N37_RS03850 | Not Available | Positive | 820319 - 821839 | 58389.9 |
| hdod domain-containing protein | D0N37_RS03855 | Not Available | Positive | 821950 - 822795 | 31683.2 |
| methionine adenosyltransferase | D0N37_RS03860 | Not Available | Negative | 822861 - 824012 | 41499.3 |
| transketolase | D0N37_RS03865 | Not Available | Positive | 824273 - 826267 | 72562.5 |
| methyl-accepting chemotaxis protein | D0N37_RS03870 | Not Available | Negative | 826359 - 828374 | 72438.0 |
| symmetrical bis(5'-nucleosyl)-tetraphosphatase | D0N37_RS03875 | Not Available | Negative | 828609 - 829406 | 29347.9 |
| co2+/mg2+ efflux protein apag | D0N37_RS03880 | Not Available | Negative | 829505 - 829894 | 14520.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.