Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas piscicida |
| Strain | DE1-A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Delaware Bay; Hainan Island; mariculture water; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoalteromonas piscicida strain DE1-A chromosome 1, complete
Gene Summary
Adenine Count
1174966 bp
Thymine Count
1179793 bp
Guanine Count
903423 bp
Cytosine Count
907796 bp
Genome Length
4165978 bp
Protein-coding Genes
3589 genes
Non-Coding Genes
211 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Hypothetical protein | D0N37_RS13255 | Not Available | Negative | 2850096 - 2850353 | 9974.91 |
| Putative tail protein | D0N37_RS13260 | Not Available | Negative | 2850357 - 2850866 | 18511.5 |
| Contractile tail sheath protein | D0N37_RS13265 | Not Available | Negative | 2850866 - 2852029 | 41744.5 |
| Putative baseplate assembly protein w | D0N37_RS13280 | Not Available | Negative | 2852479 - 2852814 | 12130.9 |
| Baseplate assembly protein v | D0N37_RS13285 | Not Available | Negative | 2852824 - 2853021 | 6453.78 |
| Baseplate protein | D0N37_RS13295 | Not Available | Negative | 2853118 - 2853711 | 21301.4 |
| hypothetical protein | D0N37_RS13300 | Not Available | Negative | 2853708 - 2854286 | 21131.1 |
| Tail assembly chaperone protein | D0N37_RS13305 | Not Available | Negative | 2854363 - 2854578 | 8491.78 |
| hypothetical protein | D0N37_RS13310 | Not Available | Negative | 2854581 - 2855258 | 25490.8 |
| Putative tail protein | D0N37_RS13315 | Not Available | Negative | 2855268 - 2856020 | 27704.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.