Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas piscicida |
| Strain | DE1-A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Delaware Bay; Hainan Island; mariculture water; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoalteromonas piscicida strain DE1-A chromosome 1, complete
Gene Summary
Adenine Count
1174966 bp
Thymine Count
1179793 bp
Guanine Count
903423 bp
Cytosine Count
907796 bp
Genome Length
4165978 bp
Protein-coding Genes
3589 genes
Non-Coding Genes
211 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| simpl domain-containing protein | D0N37_RS03785 | Not Available | Positive | 805972 - 806682 | 26194.2 |
| nyn domain-containing protein | D0N37_RS03790 | Not Available | Negative | 806767 - 807249 | 18056.4 |
| hypothetical protein | D0N37_RS03795 | Not Available | Negative | 807290 - 807979 | 25819.3 |
| nudix hydrolase | D0N37_RS03800 | Not Available | Negative | 808052 - 808564 | 19188.9 |
| aldo/keto reductase | D0N37_RS03805 | Not Available | Negative | 808640 - 809692 | 38893.4 |
| dna polymerase iv | D0N37_RS03810 | Not Available | Positive | 809845 - 810969 | 42159.4 |
| carbon starvation protein a | D0N37_RS03815 | Not Available | Positive | 811095 - 812780 | 60343.6 |
| m17 family metallopeptidase | D0N37_RS03820 | Not Available | Positive | 812850 - 814382 | 54683.2 |
| yihy/virulence factor brkb family protein | D0N37_RS03825 | Not Available | Negative | 814456 - 815421 | 35513.4 |
| mechanosensitive ion channel family protein | D0N37_RS03830 | Not Available | Positive | 815556 - 816659 | 40428.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.