Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas piscicida |
| Strain | DE1-A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Delaware Bay; Hainan Island; mariculture water; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoalteromonas piscicida strain DE1-A chromosome 1, complete
Gene Summary
Adenine Count
1174966 bp
Thymine Count
1179793 bp
Guanine Count
903423 bp
Cytosine Count
907796 bp
Genome Length
4165978 bp
Protein-coding Genes
3589 genes
Non-Coding Genes
211 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chorismate--pyruvate lyase family protein | D0N37_RS03590 | Not Available | Positive | 757518 - 758042 | 19737.7 |
| 4-hydroxybenzoate octaprenyltransferase | D0N37_RS03595 | Not Available | Positive | 758035 - 758898 | 32067.2 |
| lysr family transcriptional regulator | D0N37_RS03600 | Not Available | Negative | 758954 - 759856 | 33664.2 |
| duf3369 domain-containing protein | D0N37_RS03605 | Not Available | Negative | 759965 - 761488 | 57391.4 |
| duf2721 domain-containing protein | D0N37_RS03610 | Not Available | Negative | 761547 - 761945 | 14920.8 |
| duf2007 domain-containing protein | D0N37_RS03615 | Not Available | Positive | 762055 - 762402 | 12944.4 |
| yjag family protein | D0N37_RS03620 | Not Available | Positive | 762386 - 762979 | 22130.9 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex transferase subunit tsad | D0N37_RS03625 | Not Available | Positive | 763029 - 764042 | 36051.7 |
| glycerol-3-phosphate 1-o-acyltransferase plsy | D0N37_RS03630 | Not Available | Negative | 764046 - 764636 | 21134.8 |
| dihydroneopterin aldolase | D0N37_RS03635 | Not Available | Positive | 764761 - 765111 | 13010.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.