Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas piscicida |
| Strain | DE1-A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Delaware Bay; Hainan Island; mariculture water; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoalteromonas piscicida strain DE1-A chromosome 1, complete
Gene Summary
Adenine Count
1174966 bp
Thymine Count
1179793 bp
Guanine Count
903423 bp
Cytosine Count
907796 bp
Genome Length
4165978 bp
Protein-coding Genes
3589 genes
Non-Coding Genes
211 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sis domain-containing protein | D0N37_RS03540 | Not Available | Positive | 748700 - 749296 | 21425.5 |
| bifunctional d-glycero-beta-d-manno-heptose-7-phosphate kinase/d-glycero-beta-d-manno-heptose 1-phosphate adenylyltransferase hlde | D0N37_RS03545 | Not Available | Positive | 749293 - 750741 | 51778.3 |
| 3-deoxy-d-manno-octulosonic acid kinase | D0N37_RS03550 | Not Available | Negative | 750738 - 751451 | 27388.5 |
| glycosyltransferase family 9 protein | D0N37_RS03555 | Not Available | Positive | 751559 - 752626 | 38632.4 |
| d-glycero-beta-d-manno-heptose 1,7-bisphosphate 7-phosphatase | D0N37_RS03560 | Not Available | Positive | 752619 - 753173 | 20076.9 |
| glycine c-acetyltransferase | D0N37_RS03565 | Not Available | Positive | 753399 - 754595 | 43027.5 |
| l-threonine 3-dehydrogenase | D0N37_RS03570 | Not Available | Positive | 754640 - 755665 | 37154.9 |
| thiosulfate sulfurtransferase glpe | D0N37_RS03575 | Not Available | Positive | 755770 - 756087 | 11571.4 |
| rhomboid family intramembrane serine protease glpg | D0N37_RS03580 | Not Available | Positive | 756084 - 756911 | 31097.1 |
| flagellar basal body-associated protein flil | D0N37_RS03585 | Not Available | Negative | 756965 - 757360 | 14866.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.