Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas piscicida |
| Strain | DE1-A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Delaware Bay; Hainan Island; mariculture water; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoalteromonas piscicida strain DE1-A chromosome 1, complete
Gene Summary
Adenine Count
1174966 bp
Thymine Count
1179793 bp
Guanine Count
903423 bp
Cytosine Count
907796 bp
Genome Length
4165978 bp
Protein-coding Genes
3589 genes
Non-Coding Genes
211 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna adenosine(34) deaminase tada | D0N37_RS03490 | Not Available | Positive | 735692 - 736192 | 18129.9 |
| hypothetical protein | D0N37_RS03495 | Not Available | Negative | 736189 - 736371 | 7378.21 |
| membrane-bound lytic murein transglycosylase mltf | D0N37_RS03500 | Not Available | Negative | 736497 - 737927 | 54343.3 |
| phosphoribosylformylglycinamidine synthase | D0N37_RS03505 | Not Available | Positive | 738129 - 742013 | 140590.0 |
| ydbh domain-containing protein | D0N37_RS03510 | Not Available | Positive | 742123 - 744675 | 92561.3 |
| ynbe family lipoprotein | D0N37_RS03515 | Not Available | Positive | 744679 - 744858 | 6845.37 |
| ydbl family protein | D0N37_RS03520 | Not Available | Positive | 744868 - 745188 | 11515.0 |
| duf1415 domain-containing protein | D0N37_RS03525 | Not Available | Negative | 745255 - 745797 | 20808.2 |
| integrase core domain-containing protein | D0N37_RS03530 | Not Available | Negative | 745801 - 747068 | 44997.1 |
| capsule assembly wzi family protein | D0N37_RS03535 | Not Available | Positive | 747214 - 748659 | 54490.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.