Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas piscicida |
| Strain | DE1-A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Delaware Bay; Hainan Island; mariculture water; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoalteromonas piscicida strain DE1-A chromosome 1, complete
Gene Summary
Adenine Count
1174966 bp
Thymine Count
1179793 bp
Guanine Count
903423 bp
Cytosine Count
907796 bp
Genome Length
4165978 bp
Protein-coding Genes
3589 genes
Non-Coding Genes
211 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oxidative damage protection protein | D0N37_RS03440 | Not Available | Positive | 727688 - 727960 | 10825.0 |
| octaprenyl diphosphate synthase | D0N37_RS03445 | Not Available | Negative | 728025 - 728996 | 35340.6 |
| 50s ribosomal protein l21 | D0N37_RS03450 | Not Available | Positive | 729414 - 729725 | 11491.0 |
| 50s ribosomal protein l27 | D0N37_RS03455 | Not Available | Positive | 729745 - 730002 | 9109.94 |
| obg family gtpase cgta | D0N37_RS03460 | Not Available | Positive | 730171 - 731328 | 42834.5 |
| type 3 dihydrofolate reductase | D0N37_RS03465 | Not Available | Positive | 731523 - 732002 | 18141.7 |
| duf3718 domain-containing protein | D0N37_RS03470 | Not Available | Positive | 732082 - 732453 | 13247.9 |
| ribosome hibernation-promoting factor, hpf/yfia family | D0N37_RS03475 | Not Available | Positive | 732674 - 733030 | 13247.0 |
| integrase core domain-containing protein | D0N37_RS03480 | Not Available | Positive | 733117 - 734033 | 33993.8 |
| inosine/guanosine kinase | D0N37_RS03485 | Not Available | Negative | 734127 - 735431 | 48608.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.