Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas piscicida |
| Strain | DE1-A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Delaware Bay; Hainan Island; mariculture water; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoalteromonas piscicida strain DE1-A chromosome 1, complete
Gene Summary
Adenine Count
1174966 bp
Thymine Count
1179793 bp
Guanine Count
903423 bp
Cytosine Count
907796 bp
Genome Length
4165978 bp
Protein-coding Genes
3589 genes
Non-Coding Genes
211 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D0N37_RS03290 | Not Available | Negative | 702656 - 702952 | 11345.1 |
| trmh family rna methyltransferase | D0N37_RS03295 | Not Available | Positive | 703080 - 703814 | 26334.8 |
| aaa family atpase | D0N37_RS03300 | Not Available | Positive | 703879 - 707268 | 126445.0 |
| cell division protein zipa | D0N37_RS03305 | Not Available | Positive | 707287 - 708012 | 26587.4 |
| nad-dependent dna ligase liga | D0N37_RS03310 | Not Available | Positive | 708078 - 710096 | 74109.3 |
| duf2919 domain-containing protein | D0N37_RS03315 | Not Available | Positive | 710101 - 710613 | 19689.5 |
| peptide-methionine (r)-s-oxide reductase msrb | D0N37_RS03320 | Not Available | Positive | 710615 - 711055 | 16383.3 |
| response regulator | D0N37_RS03325 | Not Available | Negative | 711079 - 712710 | 62317.7 |
| Trna-val | Not Available | Not Available | Positive | 713104 - 713179 | Not Available |
| Trna-val | Not Available | Not Available | Positive | 713216 - 713291 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.