Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas piscicida |
| Strain | DE1-A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Delaware Bay; Hainan Island; mariculture water; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoalteromonas piscicida strain DE1-A chromosome 1, complete
Gene Summary
Adenine Count
1174966 bp
Thymine Count
1179793 bp
Guanine Count
903423 bp
Cytosine Count
907796 bp
Genome Length
4165978 bp
Protein-coding Genes
3589 genes
Non-Coding Genes
211 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoglycerate kinase | D0N37_RS03130 | Not Available | Positive | 673807 - 674985 | 41193.0 |
| class ii fructose-bisphosphate aldolase | D0N37_RS03135 | Not Available | Positive | 675184 - 676248 | 38407.9 |
| porin | D0N37_RS03145 | Not Available | Positive | 676779 - 677732 | 34917.6 |
| phosphate regulon transcriptional regulator phob | D0N37_RS03150 | Not Available | Positive | 678027 - 678716 | 26067.6 |
| integrase core domain-containing protein | D0N37_RS03155 | Not Available | Positive | 678768 - 680095 | 50576.4 |
| psts family phosphate abc transporter substrate-binding protein | D0N37_RS03160 | Not Available | Positive | 680173 - 681141 | 35140.0 |
| methyl-accepting chemotaxis protein | D0N37_RS03165 | Not Available | Positive | 681352 - 682974 | 58277.9 |
| phosphate abc transporter substrate-binding protein | D0N37_RS03175 | Not Available | Negative | 683370 - 683777 | 14117.8 |
| porin | D0N37_RS03180 | Not Available | Negative | 683789 - 684982 | 43841.5 |
| hypothetical protein | D0N37_RS03185 | Not Available | Negative | 685325 - 685555 | 8556.27 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.