Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas piscicida |
| Strain | DE1-A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Delaware Bay; Hainan Island; mariculture water; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoalteromonas piscicida strain DE1-A chromosome 1, complete
Gene Summary
Adenine Count
1174966 bp
Thymine Count
1179793 bp
Guanine Count
903423 bp
Cytosine Count
907796 bp
Genome Length
4165978 bp
Protein-coding Genes
3589 genes
Non-Coding Genes
211 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-ala | Not Available | Not Available | Positive | 659232 - 659307 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | Positive | 659591 - 662580 | Not Available |
| 5s ribosomal rna | Not Available | Not Available | Positive | 662772 - 662885 | Not Available |
| formyltetrahydrofolate deformylase | D0N37_RS03095 | Not Available | Negative | 663229 - 664059 | 30918.2 |
| integrase core domain-containing protein | D0N37_RS03100 | Not Available | Negative | 664177 - 667601 | 123649.0 |
| duf4212 domain-containing protein | D0N37_RS03105 | Not Available | Positive | 668012 - 668275 | 10084.4 |
| sodium:solute symporter family protein | D0N37_RS03110 | Not Available | Positive | 668287 - 670011 | 61035.0 |
| integrase core domain-containing protein | D0N37_RS03115 | Not Available | Positive | 670102 - 671939 | 66298.8 |
| 3'-5' exonuclease | D0N37_RS03120 | Not Available | Positive | 671943 - 672560 | 23080.2 |
| erythrose-4-phosphate dehydrogenase | D0N37_RS03125 | Not Available | Positive | 672670 - 673680 | 37068.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.