Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas piscicida |
| Strain | DE1-A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Delaware Bay; Hainan Island; mariculture water; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoalteromonas piscicida strain DE1-A chromosome 1, complete
Gene Summary
Adenine Count
1174966 bp
Thymine Count
1179793 bp
Guanine Count
903423 bp
Cytosine Count
907796 bp
Genome Length
4165978 bp
Protein-coding Genes
3589 genes
Non-Coding Genes
211 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| potra domain-containing protein | D0N37_RS03030 | Not Available | Negative | 648006 - 649673 | 63884.9 |
| duf3630 family protein | D0N37_RS03035 | Not Available | Negative | 649825 - 650112 | 11245.1 |
| dna helicase recq | D0N37_RS03040 | Not Available | Negative | 650112 - 651926 | 68860.4 |
| eama family transporter rard | D0N37_RS03045 | Not Available | Positive | 652119 - 653009 | 33374.9 |
| response regulator | D0N37_RS03050 | Not Available | Negative | 652998 - 654233 | 46900.1 |
| duf413 domain-containing protein | D0N37_RS03055 | Not Available | Negative | 654494 - 654865 | 13868.3 |
| lysr family transcriptional regulator | D0N37_RS03060 | Not Available | Positive | 654953 - 655798 | 31358.7 |
| porin | D0N37_RS03065 | Not Available | Positive | 655947 - 656876 | 33320.6 |
| 16s ribosomal rna | Not Available | Not Available | Positive | 657428 - 658960 | Not Available |
| Trna-ile | Not Available | Not Available | Positive | 659038 - 659114 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.