Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas piscicida |
| Strain | DE1-A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Delaware Bay; Hainan Island; mariculture water; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoalteromonas piscicida strain DE1-A chromosome 1, complete
Gene Summary
Adenine Count
1174966 bp
Thymine Count
1179793 bp
Guanine Count
903423 bp
Cytosine Count
907796 bp
Genome Length
4165978 bp
Protein-coding Genes
3589 genes
Non-Coding Genes
211 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ykof family thiamine/hydroxymethylpyrimidine-binding protein | D0N37_RS02980 | Not Available | Positive | 641599 - 641865 | 10065.1 |
| nicotinamide riboside transporter pnuc | D0N37_RS02985 | Not Available | Positive | 641865 - 642485 | 24190.7 |
| phosphotransferase | D0N37_RS02990 | Not Available | Positive | 642448 - 643260 | 31166.9 |
| helix-turn-helix domain-containing protein | D0N37_RS02995 | Not Available | Negative | 643327 - 643509 | 6807.2 |
| Trna-arg | Not Available | Not Available | Positive | 643707 - 643781 | Not Available |
| integrase core domain-containing protein | D0N37_RS03005 | Not Available | Negative | 643796 - 644759 | 34828.2 |
| atp-dependent zinc protease | D0N37_RS03010 | Not Available | Positive | 645043 - 645477 | 16656.9 |
| 30s ribosomal protein s6--l-glutamate ligase | D0N37_RS03015 | Not Available | Positive | 645474 - 646379 | 32564.8 |
| succinylglutamate desuccinylase/aspartoacylase family protein | D0N37_RS03020 | Not Available | Positive | 646366 - 647394 | 37247.4 |
| mechanosensitive ion channel domain-containing protein | D0N37_RS03025 | Not Available | Negative | 647384 - 647947 | 21059.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.