Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas piscicida |
| Strain | DE1-A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Delaware Bay; Hainan Island; mariculture water; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoalteromonas piscicida strain DE1-A chromosome 1, complete
Gene Summary
Adenine Count
1174966 bp
Thymine Count
1179793 bp
Guanine Count
903423 bp
Cytosine Count
907796 bp
Genome Length
4165978 bp
Protein-coding Genes
3589 genes
Non-Coding Genes
211 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fe-s cluster assembly scaffold iscu | D0N37_RS02930 | Not Available | Positive | 632291 - 632674 | 13409.0 |
| iron-sulfur cluster assembly protein isca | D0N37_RS02935 | Not Available | Positive | 632684 - 633007 | 11590.6 |
| co-chaperone hscb | D0N37_RS02940 | Not Available | Positive | 633068 - 633592 | 20035.8 |
| fe-s protein assembly chaperone hsca | D0N37_RS02945 | Not Available | Positive | 633634 - 635496 | 66727.8 |
| isc system 2fe-2s type ferredoxin | D0N37_RS02950 | Not Available | Positive | 635498 - 635836 | 12338.5 |
| nad-dependent succinate-semialdehyde dehydrogenase | D0N37_RS02955 | Not Available | Positive | 635926 - 637359 | 51034.1 |
| ndp-sugar synthase | D0N37_RS02960 | Not Available | Positive | 637470 - 638351 | 32585.3 |
| phosphotransferase enzyme family protein | D0N37_RS02965 | Not Available | Positive | 638398 - 639471 | 39887.1 |
| gfo/idh/moca family protein | D0N37_RS02970 | Not Available | Positive | 639612 - 640988 | 51629.6 |
| nuclear transport factor 2 family protein | D0N37_RS02975 | Not Available | Positive | 641069 - 641569 | 19278.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.