Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas piscicida |
| Strain | DE1-A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Delaware Bay; Hainan Island; mariculture water; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoalteromonas piscicida strain DE1-A chromosome 1, complete
Gene Summary
Adenine Count
1174966 bp
Thymine Count
1179793 bp
Guanine Count
903423 bp
Cytosine Count
907796 bp
Genome Length
4165978 bp
Protein-coding Genes
3589 genes
Non-Coding Genes
211 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | D0N37_RS02880 | Not Available | Negative | 622266 - 623399 | 41428.8 |
| duf2058 domain-containing protein | D0N37_RS02885 | Not Available | Positive | 623588 - 624124 | 20695.4 |
| c-type cytochrome | D0N37_RS02890 | Not Available | Positive | 624197 - 624520 | 11291.0 |
| class ii aldolase/adducin family protein | D0N37_RS02895 | Not Available | Positive | 624642 - 625409 | 28379.9 |
| mandelate racemase/muconate lactonizing enzyme family protein | D0N37_RS02900 | Not Available | Positive | 625418 - 626593 | 43784.1 |
| hypothetical protein | D0N37_RS02905 | Not Available | Negative | 626677 - 628224 | 58636.9 |
| inositol-1-monophosphatase | D0N37_RS02910 | Not Available | Negative | 628462 - 629265 | 29135.0 |
| trna (cytosine(32)/uridine(32)-2'-o)-methyltransferase trmj | D0N37_RS02915 | Not Available | Positive | 629481 - 630209 | 26553.8 |
| fe-s cluster assembly transcriptional regulator iscr | D0N37_RS02920 | Not Available | Positive | 630501 - 630992 | 17628.1 |
| iscs subfamily cysteine desulfurase | D0N37_RS02925 | Not Available | Positive | 631016 - 632230 | 45106.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.