Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas piscicida |
| Strain | DE1-A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Delaware Bay; Hainan Island; mariculture water; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoalteromonas piscicida strain DE1-A chromosome 1, complete
Gene Summary
Adenine Count
1174966 bp
Thymine Count
1179793 bp
Guanine Count
903423 bp
Cytosine Count
907796 bp
Genome Length
4165978 bp
Protein-coding Genes
3589 genes
Non-Coding Genes
211 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5-carboxymethyl-2-hydroxymuconate delta-isomerase | D0N37_RS02680 | Not Available | Negative | 578455 - 578784 | 12208.9 |
| hypothetical protein | D0N37_RS02685 | Not Available | Positive | 578866 - 579657 | 29208.1 |
| lyse family transporter | D0N37_RS02690 | Not Available | Positive | 579641 - 580264 | 23011.4 |
| gamma-glutamylcyclotransferase family protein | D0N37_RS02695 | Not Available | Positive | 580264 - 580794 | 19848.3 |
| serine hydrolase | D0N37_RS02700 | Not Available | Positive | 580842 - 582404 | 57830.1 |
| integrase core domain-containing protein | D0N37_RS02705 | Not Available | Positive | 582509 - 583428 | 33697.3 |
| duf4144 family protein | D0N37_RS02710 | Not Available | Negative | 583425 - 583727 | 11502.9 |
| eal domain-containing protein | D0N37_RS02715 | Not Available | Positive | 583804 - 586320 | 94606.7 |
| duf2797 domain-containing protein | D0N37_RS02720 | Not Available | Negative | 586293 - 587114 | 30497.8 |
| phosphoribosylamine--glycine ligase | D0N37_RS02725 | Not Available | Negative | 587229 - 588512 | 45442.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.