Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas piscicida |
| Strain | DE1-A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Delaware Bay; Hainan Island; mariculture water; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoalteromonas piscicida strain DE1-A chromosome 1, complete
Gene Summary
Adenine Count
1174966 bp
Thymine Count
1179793 bp
Guanine Count
903423 bp
Cytosine Count
907796 bp
Genome Length
4165978 bp
Protein-coding Genes
3589 genes
Non-Coding Genes
211 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| preprotein translocase subunit yajc | D0N37_RS02635 | Not Available | Positive | 568348 - 568686 | 11887.7 |
| protein translocase subunit secd | D0N37_RS02640 | Not Available | Positive | 568711 - 570570 | 67394.0 |
| protein translocase subunit secf | D0N37_RS02645 | Not Available | Positive | 570580 - 571524 | 33853.7 |
| hypothetical protein | D0N37_RS02650 | Not Available | Positive | 571657 - 572184 | 19233.1 |
| bifunctional diguanylate cyclase/phosphodiesterase | D0N37_RS02655 | Not Available | Positive | 572297 - 574078 | 66927.5 |
| substrate-binding periplasmic protein | D0N37_RS02660 | Not Available | Positive | 574165 - 574956 | 29959.4 |
| hypothetical protein | D0N37_RS02665 | Not Available | Negative | 574962 - 575582 | 23543.5 |
| hypothetical protein | D0N37_RS25350 | Not Available | Negative | 575592 - 575717 | 4505.27 |
| methyl-accepting chemotaxis protein | D0N37_RS02670 | Not Available | Negative | 575963 - 577594 | 58810.6 |
| 16s rrna pseudouridine(516) synthase rsua | D0N37_RS02675 | Not Available | Negative | 577721 - 578431 | 26672.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.