Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas piscicida |
| Strain | DE1-A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Delaware Bay; Hainan Island; mariculture water; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoalteromonas piscicida strain DE1-A chromosome 1, complete
Gene Summary
Adenine Count
1174966 bp
Thymine Count
1179793 bp
Guanine Count
903423 bp
Cytosine Count
907796 bp
Genome Length
4165978 bp
Protein-coding Genes
3589 genes
Non-Coding Genes
211 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tigr00153 family protein | D0N37_RS02585 | Not Available | Positive | 557334 - 558011 | 25763.3 |
| inorganic phosphate transporter | D0N37_RS02590 | Not Available | Positive | 558048 - 559316 | 43676.2 |
| hydrogen peroxide-inducible genes activator | D0N37_RS02595 | Not Available | Positive | 559425 - 560336 | 34100.2 |
| rna polymerase sigma factor | D0N37_RS02600 | Not Available | Positive | 560460 - 560999 | 20799.9 |
| hypothetical protein | D0N37_RS02605 | Not Available | Positive | 560992 - 561564 | 21263.4 |
| hypothetical protein | D0N37_RS02610 | Not Available | Positive | 561561 - 562451 | 33654.1 |
| hypothetical protein | D0N37_RS02615 | Not Available | Negative | 562542 - 562739 | 7446.39 |
| eal domain-containing protein | D0N37_RS02620 | Not Available | Negative | 562898 - 565405 | 94185.8 |
| trna preq1(34) s-adenosylmethionine ribosyltransferase-isomerase quea | D0N37_RS02625 | Not Available | Positive | 565726 - 566763 | 38398.1 |
| trna guanosine(34) transglycosylase tgt | D0N37_RS02630 | Not Available | Positive | 567188 - 568327 | 42506.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.