Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas piscicida |
| Strain | DE1-A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Delaware Bay; Hainan Island; mariculture water; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoalteromonas piscicida strain DE1-A chromosome 1, complete
Gene Summary
Adenine Count
1174966 bp
Thymine Count
1179793 bp
Guanine Count
903423 bp
Cytosine Count
907796 bp
Genome Length
4165978 bp
Protein-coding Genes
3589 genes
Non-Coding Genes
211 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1566 domain-containing protein | D0N37_RS02485 | Not Available | Positive | 536390 - 536893 | 18730.8 |
| yggn family protein | D0N37_RS02490 | Not Available | Positive | 537063 - 537833 | 28823.4 |
| amidohydrolase family protein | D0N37_RS02495 | Not Available | Negative | 537828 - 538661 | 31560.8 |
| sdr family nad(p)-dependent oxidoreductase | D0N37_RS02500 | Not Available | Negative | 538675 - 539403 | 25309.1 |
| peptidylprolyl isomerase | D0N37_RS02505 | Not Available | Negative | 539406 - 539894 | 17621.7 |
| integrase core domain-containing protein | D0N37_RS02510 | Not Available | Negative | 539996 - 541410 | 50000.0 |
| hypothetical protein | D0N37_RS02515 | Not Available | Negative | 541519 - 542502 | 36782.6 |
| cell division protein zapa | D0N37_RS02520 | Not Available | Negative | 542502 - 542786 | 10469.4 |
| hypothetical protein | D0N37_RS02525 | Not Available | Negative | 542786 - 543013 | 8621.07 |
| 23s rrna (adenine(2030)-n(6))-methyltransferase rlmj | D0N37_RS02530 | Not Available | Positive | 543247 - 544089 | 31569.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.