Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas piscicida |
| Strain | DE1-A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Delaware Bay; Hainan Island; mariculture water; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoalteromonas piscicida strain DE1-A chromosome 1, complete
Gene Summary
Adenine Count
1174966 bp
Thymine Count
1179793 bp
Guanine Count
903423 bp
Cytosine Count
907796 bp
Genome Length
4165978 bp
Protein-coding Genes
3589 genes
Non-Coding Genes
211 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| biliverdin-producing heme oxygenase | D0N37_RS02280 | Not Available | Positive | 493874 - 494464 | 21544.8 |
| hypothetical protein | D0N37_RS02285 | Not Available | Negative | 494536 - 494760 | 8097.74 |
| hypothetical protein | D0N37_RS02290 | Not Available | Negative | 494805 - 495491 | 27283.6 |
| helix-turn-helix domain-containing protein | D0N37_RS02300 | Not Available | Negative | 495981 - 496298 | 12394.8 |
| hypothetical protein | D0N37_RS02305 | Not Available | Positive | 496555 - 496773 | 8482.11 |
| duf3299 domain-containing protein | D0N37_RS02310 | Not Available | Negative | 496872 - 497378 | 18274.1 |
| abc transporter permease | D0N37_RS02315 | Not Available | Negative | 497389 - 498756 | 49932.8 |
| abc transporter atp-binding protein | D0N37_RS02320 | Not Available | Negative | 498750 - 499442 | 25159.1 |
| phosphoribosylaminoimidazolesuccinocarboxamide synthase | D0N37_RS02325 | Not Available | Positive | 499631 - 500731 | 40807.5 |
| methylamine utilization protein | D0N37_RS02330 | Not Available | Positive | 500848 - 501477 | 23180.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.