Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas piscicida |
| Strain | DE1-A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Delaware Bay; Hainan Island; mariculture water; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoalteromonas piscicida strain DE1-A chromosome 1, complete
Gene Summary
Adenine Count
1174966 bp
Thymine Count
1179793 bp
Guanine Count
903423 bp
Cytosine Count
907796 bp
Genome Length
4165978 bp
Protein-coding Genes
3589 genes
Non-Coding Genes
211 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetr/acrr family transcriptional regulator | D0N37_RS02230 | Not Available | Negative | 481834 - 482559 | 27139.8 |
| alpha/beta hydrolase | D0N37_RS02235 | Not Available | Negative | 482748 - 483410 | 24036.8 |
| atp-dependent dna helicase recg | D0N37_RS02240 | Not Available | Negative | 484314 - 486401 | 77106.5 |
| trna (guanosine(18)-2'-o)-methyltransferase trmh | D0N37_RS02245 | Not Available | Negative | 486430 - 487128 | 26281.4 |
| transcriptional regulator asnc | D0N37_RS02250 | Not Available | Negative | 487179 - 487637 | 17116.7 |
| integrase core domain-containing protein | D0N37_RS02255 | Not Available | Positive | 487799 - 488793 | 37245.6 |
| guanylate kinase | D0N37_RS02260 | Not Available | Positive | 490011 - 490634 | 23290.4 |
| dna-directed rna polymerase subunit omega | D0N37_RS02265 | Not Available | Positive | 490722 - 490997 | 9899.73 |
| bifunctional gtp diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase | D0N37_RS02270 | Not Available | Positive | 491245 - 493347 | 79499.8 |
| rida family protein | D0N37_RS02275 | Not Available | Positive | 493358 - 493750 | 14167.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.