Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas piscicida |
| Strain | DE1-A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Delaware Bay; Hainan Island; mariculture water; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoalteromonas piscicida strain DE1-A chromosome 1, complete
Gene Summary
Adenine Count
1174966 bp
Thymine Count
1179793 bp
Guanine Count
903423 bp
Cytosine Count
907796 bp
Genome Length
4165978 bp
Protein-coding Genes
3589 genes
Non-Coding Genes
211 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sensor histidine kinase | D0N37_RS02180 | Not Available | Positive | 464116 - 464691 | 21482.9 |
| glutathione-disulfide reductase | D0N37_RS02185 | Not Available | Negative | 464769 - 466127 | 49059.8 |
| oligopeptidase a | D0N37_RS02190 | Not Available | Positive | 466296 - 468335 | 76502.3 |
| integrase core domain-containing protein | D0N37_RS25610 | Not Available | Positive | 468461 - 469611 | 41893.6 |
| class i sam-dependent methyltransferase | D0N37_RS02200 | Not Available | Positive | 469743 - 470441 | 25700.1 |
| methyl-accepting chemotaxis protein | D0N37_RS02205 | Not Available | Positive | 470604 - 472526 | 70220.5 |
| s8 family peptidase | D0N37_RS02210 | Not Available | Negative | 473618 - 475768 | 73530.8 |
| nad(p)/fad-dependent oxidoreductase | D0N37_RS02215 | Not Available | Positive | 476313 - 477500 | 43320.6 |
| efflux rnd transporter permease subunit | D0N37_RS02220 | Not Available | Negative | 477611 - 480718 | 112310.0 |
| efflux rnd transporter periplasmic adaptor subunit | D0N37_RS02225 | Not Available | Negative | 480718 - 481818 | 40107.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.