Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas piscicida |
| Strain | DE1-A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Delaware Bay; Hainan Island; mariculture water; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoalteromonas piscicida strain DE1-A chromosome 1, complete
Gene Summary
Adenine Count
1174966 bp
Thymine Count
1179793 bp
Guanine Count
903423 bp
Cytosine Count
907796 bp
Genome Length
4165978 bp
Protein-coding Genes
3589 genes
Non-Coding Genes
211 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleoid occlusion factor slma | D0N37_RS02120 | Not Available | Negative | 452757 - 453344 | 22625.4 |
| bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase coabc | D0N37_RS02125 | Not Available | Negative | 453501 - 454697 | 42376.3 |
| radc family protein | D0N37_RS02130 | Not Available | Positive | 454826 - 455500 | 24856.2 |
| 50s ribosomal protein l28 | D0N37_RS02135 | Not Available | Positive | 455960 - 456196 | 9028.14 |
| 50s ribosomal protein l33 | D0N37_RS02140 | Not Available | Positive | 456209 - 456364 | 6117.63 |
| winged helix-turn-helix domain-containing protein | D0N37_RS02145 | Not Available | Negative | 456421 - 458394 | 75217.0 |
| alpha/beta hydrolase | D0N37_RS02150 | Not Available | Positive | 458526 - 460337 | 67302.5 |
| two-component regulator propeller domain-containing protein | D0N37_RS02160 | Not Available | Positive | 460940 - 461326 | 14888.9 |
| hypothetical protein | D0N37_RS02165 | Not Available | Positive | 461374 - 462000 | 23089.3 |
| triple tyrosine motif-containing protein | D0N37_RS02175 | Not Available | Positive | 462428 - 464089 | 62702.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.