Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas piscicida |
| Strain | DE1-A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Delaware Bay; Hainan Island; mariculture water; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoalteromonas piscicida strain DE1-A chromosome 1, complete
Gene Summary
Adenine Count
1174966 bp
Thymine Count
1179793 bp
Guanine Count
903423 bp
Cytosine Count
907796 bp
Genome Length
4165978 bp
Protein-coding Genes
3589 genes
Non-Coding Genes
211 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sensor histidine kinase | D0N37_RS02015 | Not Available | Negative | 426558 - 427766 | 46216.1 |
| response regulator transcription factor | D0N37_RS02020 | Not Available | Negative | 427759 - 428448 | 25939.8 |
| duf3019 domain-containing protein | D0N37_RS02025 | Not Available | Negative | 428451 - 428759 | 11411.8 |
| mipa/ompv family protein | D0N37_RS02035 | Not Available | Negative | 429032 - 429619 | 22114.9 |
| s8 family serine peptidase | D0N37_RS02040 | Not Available | Positive | 430040 - 433876 | 139267.0 |
| hypothetical protein | D0N37_RS02045 | Not Available | Positive | 433876 - 435093 | 45077.2 |
| serine hydrolase domain-containing protein | D0N37_RS02050 | Not Available | Positive | 435347 - 436822 | 55379.5 |
| trna dihydrouridine(20/20a) synthase dusa | D0N37_RS02055 | Not Available | Positive | 437048 - 438067 | 38115.5 |
| pspa/im30 family protein | D0N37_RS02060 | Not Available | Positive | 438247 - 438903 | 24973.6 |
| pspc domain-containing protein | D0N37_RS02065 | Not Available | Positive | 438951 - 439160 | 7989.05 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.