Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas piscicida |
| Strain | DE1-A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Delaware Bay; Hainan Island; mariculture water; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoalteromonas piscicida strain DE1-A chromosome 1, complete
Gene Summary
Adenine Count
1174966 bp
Thymine Count
1179793 bp
Guanine Count
903423 bp
Cytosine Count
907796 bp
Genome Length
4165978 bp
Protein-coding Genes
3589 genes
Non-Coding Genes
211 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome b | D0N37_RS01965 | Not Available | Positive | 418189 - 419490 | 49244.9 |
| cytochrome c1 | D0N37_RS01970 | Not Available | Positive | 419487 - 420224 | 27469.2 |
| stringent starvation protein sspa | D0N37_RS01975 | Not Available | Positive | 420321 - 420947 | 23650.6 |
| clpxp protease specificity-enhancing factor | D0N37_RS01980 | Not Available | Positive | 420947 - 421372 | 15857.6 |
| division/outer membrane stress-associated lipid-binding lipoprotein | D0N37_RS01985 | Not Available | Negative | 421417 - 421983 | 20145.7 |
| sis domain-containing protein | D0N37_RS01990 | Not Available | Negative | 421980 - 422567 | 21145.5 |
| integrase core domain-containing protein | D0N37_RS01995 | Not Available | Negative | 422571 - 422933 | 14136.2 |
| integrase core domain-containing protein | D0N37_RS02000 | Not Available | Negative | 422943 - 424828 | 69664.7 |
| 16s rrna (cytidine(1402)-2'-o)-methyltransferase | D0N37_RS02005 | Not Available | Positive | 424889 - 425749 | 31109.5 |
| Ncrna_class:rnase_p_rna | Not Available | Not Available | Positive | 425804 - 426174 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.