Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas piscicida |
| Strain | DE1-A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Delaware Bay; Hainan Island; mariculture water; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoalteromonas piscicida strain DE1-A chromosome 1, complete
Gene Summary
Adenine Count
1174966 bp
Thymine Count
1179793 bp
Guanine Count
903423 bp
Cytosine Count
907796 bp
Genome Length
4165978 bp
Protein-coding Genes
3589 genes
Non-Coding Genes
211 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbon-nitrogen hydrolase family protein | D0N37_RS01810 | Not Available | Positive | 392183 - 392998 | 30198.9 |
| metalloprotease tldd | D0N37_RS01815 | Not Available | Positive | 392995 - 394434 | 51181.6 |
| ribosome biogenesis factor yjga | D0N37_RS01820 | Not Available | Negative | 394521 - 395039 | 19931.3 |
| integrase core domain-containing protein | D0N37_RS01825 | Not Available | Positive | 395176 - 396524 | 48112.6 |
| magnesium transporter | D0N37_RS01830 | Not Available | Negative | 396590 - 397948 | 49347.7 |
| hpr family phosphocarrier protein | D0N37_RS01840 | Not Available | Negative | 398671 - 398940 | 9539.29 |
| rnase adapter rapz | D0N37_RS01845 | Not Available | Negative | 398941 - 399807 | 33006.6 |
| pts iia-like nitrogen regulatory protein ptsn | D0N37_RS01850 | Not Available | Negative | 399800 - 400258 | 16677.2 |
| ribosome hibernation promoting factor | D0N37_RS01855 | Not Available | Negative | 400260 - 400547 | 11012.2 |
| rna polymerase factor sigma-54 | D0N37_RS01860 | Not Available | Negative | 400577 - 402076 | 55904.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.