Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas piscicida |
| Strain | DE1-A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Delaware Bay; Hainan Island; mariculture water; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoalteromonas piscicida strain DE1-A chromosome 1, complete
Gene Summary
Adenine Count
1174966 bp
Thymine Count
1179793 bp
Guanine Count
903423 bp
Cytosine Count
907796 bp
Genome Length
4165978 bp
Protein-coding Genes
3589 genes
Non-Coding Genes
211 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| eal domain-containing protein | D0N37_RS01765 | Not Available | Positive | 378962 - 380548 | 58856.4 |
| 1-aminocyclopropane-1-carboxylate deaminase/d-cysteine desulfhydrase | D0N37_RS01770 | Not Available | Negative | 380554 - 381474 | 34118.8 |
| integrase core domain-containing protein | D0N37_RS01775 | Not Available | Positive | 381774 - 383785 | 72835.8 |
| integrase core domain-containing protein | D0N37_RS01780 | Not Available | Positive | 383853 - 384895 | 38360.1 |
| rod shape-determining protein mrec | D0N37_RS01785 | Not Available | Positive | 384895 - 385737 | 30881.5 |
| rod shape-determining protein mred | D0N37_RS01790 | Not Available | Positive | 385727 - 386209 | 18849.8 |
| maf family protein | D0N37_RS01795 | Not Available | Positive | 386209 - 386775 | 20522.6 |
| ribonuclease g | D0N37_RS01800 | Not Available | Positive | 386779 - 388251 | 55071.2 |
| yhdp family protein | D0N37_RS24565 | Not Available | Positive | 388265 - 390688 | 89283.5 |
| yhdp family protein | D0N37_RS24570 | Not Available | Positive | 390787 - 392190 | 51110.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.