Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas piscicida |
| Strain | DE1-A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Delaware Bay; Hainan Island; mariculture water; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoalteromonas piscicida strain DE1-A chromosome 1, complete
Gene Summary
Adenine Count
1174966 bp
Thymine Count
1179793 bp
Guanine Count
903423 bp
Cytosine Count
907796 bp
Genome Length
4165978 bp
Protein-coding Genes
3589 genes
Non-Coding Genes
211 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf411 domain-containing protein | D0N37_RS24210 | Not Available | Positive | 1233566 - 1234039 | 17760.6 |
| tolc family protein | D0N37_RS24215 | Not Available | Positive | 1234039 - 1235361 | 49080.4 |
| efflux rnd transporter periplasmic adaptor subunit | D0N37_RS24220 | Not Available | Positive | 1235354 - 1237080 | 63109.1 |
| efflux rnd transporter permease subunit | D0N37_RS24225 | Not Available | Positive | 1237093 - 1240209 | 113022.0 |
| hypothetical protein | D0N37_RS24230 | Not Available | Positive | 1240430 - 1241092 | 25068.5 |
| sulfotransferase family 2 domain-containing protein | D0N37_RS24235 | Not Available | Positive | 1241164 - 1241757 | 23375.6 |
| gnat family n-acetyltransferase | D0N37_RS24240 | Not Available | Positive | 1241886 - 1242494 | 22852.4 |
| phytanoyl-coa dioxygenase family protein | D0N37_RS25300 | Not Available | Negative | 1242576 - 1243148 | 21585.4 |
| hypothetical protein | D0N37_RS25305 | Not Available | Negative | 1243073 - 1243477 | 15079.4 |
| osmc domain/ycao domain-containing protein | D0N37_RS24250 | Not Available | Positive | 1243744 - 1245924 | 81729.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.