Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas piscicida |
| Strain | DE1-A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Delaware Bay; Hainan Island; mariculture water; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoalteromonas piscicida strain DE1-A chromosome 1, complete
Gene Summary
Adenine Count
1174966 bp
Thymine Count
1179793 bp
Guanine Count
903423 bp
Cytosine Count
907796 bp
Genome Length
4165978 bp
Protein-coding Genes
3589 genes
Non-Coding Genes
211 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3379 family protein | D0N37_RS24090 | Not Available | Negative | 1211744 - 1212463 | 26651.5 |
| sigma-70 family rna polymerase sigma factor | D0N37_RS24095 | Not Available | Negative | 1212463 - 1212978 | 19947.7 |
| batd family protein | D0N37_RS24100 | Not Available | Negative | 1213134 - 1214765 | 60017.7 |
| vwa domain-containing protein | D0N37_RS24105 | Not Available | Negative | 1214759 - 1216699 | 71707.1 |
| vwa domain-containing protein | D0N37_RS24110 | Not Available | Negative | 1216707 - 1217690 | 36077.1 |
| duf4381 domain-containing protein | D0N37_RS24115 | Not Available | Negative | 1217683 - 1218114 | 16375.8 |
| duf58 domain-containing protein | D0N37_RS24120 | Not Available | Negative | 1218115 - 1219068 | 36136.3 |
| efflux rnd transporter periplasmic adaptor subunit | D0N37_RS24125 | Not Available | Negative | 1219073 - 1220028 | 35741.8 |
| acetyl-coa c-acyltransferase fadi | D0N37_RS24130 | Not Available | Positive | 1220297 - 1221607 | 46262.8 |
| fatty acid oxidation complex subunit alpha fadj | D0N37_RS24135 | Not Available | Positive | 1221607 - 1223709 | 76148.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.