Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas piscicida |
| Strain | DE1-A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Delaware Bay; Hainan Island; mariculture water; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoalteromonas piscicida strain DE1-A chromosome 1, complete
Gene Summary
Adenine Count
1174966 bp
Thymine Count
1179793 bp
Guanine Count
903423 bp
Cytosine Count
907796 bp
Genome Length
4165978 bp
Protein-coding Genes
3589 genes
Non-Coding Genes
211 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5s ribosomal rna | Not Available | Not Available | Positive | 356523 - 356636 | Not Available |
| integrase core domain-containing protein | D0N37_RS01670 | Not Available | Negative | 356828 - 357865 | 39876.6 |
| integrase core domain-containing protein | D0N37_RS01675 | Not Available | Positive | 358036 - 358649 | 22023.2 |
| integrase core domain-containing protein | D0N37_RS01680 | Not Available | Positive | 358667 - 360186 | 55142.5 |
| response regulator transcription factor | D0N37_RS01685 | Not Available | Negative | 360218 - 360913 | 25735.7 |
| alpha/beta hydrolase family protein | D0N37_RS01690 | Not Available | Negative | 361138 - 363591 | 91318.1 |
| hemolysin family protein | D0N37_RS01695 | Not Available | Positive | 363758 - 364885 | 41783.7 |
| eal domain-containing protein | D0N37_RS01700 | Not Available | Negative | 364869 - 366077 | 45947.9 |
| metalloprotease | D0N37_RS01705 | Not Available | Positive | 366288 - 367298 | 36851.9 |
| short-chain fatty acid transporter | D0N37_RS01710 | Not Available | Negative | 367295 - 368641 | 48259.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.