Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas piscicida |
| Strain | DE1-A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Delaware Bay; Hainan Island; mariculture water; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoalteromonas piscicida strain DE1-A chromosome 1, complete
Gene Summary
Adenine Count
1174966 bp
Thymine Count
1179793 bp
Guanine Count
903423 bp
Cytosine Count
907796 bp
Genome Length
4165978 bp
Protein-coding Genes
3589 genes
Non-Coding Genes
211 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-directed rna polymerase subunit beta | D0N37_RS01615 | Not Available | Positive | 337361 - 341386 | 149749.0 |
| dna-directed rna polymerase subunit beta' | D0N37_RS01620 | Not Available | Positive | 341495 - 345676 | 154668.0 |
| 30s ribosomal protein s12 | D0N37_RS01625 | Not Available | Positive | 346027 - 346401 | 13666.7 |
| 30s ribosomal protein s7 | D0N37_RS01630 | Not Available | Positive | 346503 - 346973 | 17612.5 |
| elongation factor g | D0N37_RS01635 | Not Available | Positive | 347001 - 349115 | 77484.3 |
| elongation factor tu | D0N37_RS01640 | Not Available | Positive | 349173 - 350357 | 43463.1 |
| 16s ribosomal rna | Not Available | Not Available | Positive | 351187 - 352717 | Not Available |
| Trna-ile | Not Available | Not Available | Positive | 352795 - 352871 | Not Available |
| Trna-ala | Not Available | Not Available | Positive | 352989 - 353064 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | Positive | 353341 - 356331 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.