Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas piscicida |
| Strain | DE1-A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Delaware Bay; Hainan Island; mariculture water; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoalteromonas piscicida strain DE1-A chromosome 1, complete
Gene Summary
Adenine Count
1174966 bp
Thymine Count
1179793 bp
Guanine Count
903423 bp
Cytosine Count
907796 bp
Genome Length
4165978 bp
Protein-coding Genes
3589 genes
Non-Coding Genes
211 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase i | D0N37_RS01365 | Not Available | Positive | 291350 - 294106 | 102072.0 |
| ycei family protein | D0N37_RS01370 | Not Available | Positive | 294758 - 295327 | 20619.1 |
| duf1285 domain-containing protein | D0N37_RS01375 | Not Available | Positive | 295314 - 295844 | 20171.2 |
| ribosome biogenesis gtp-binding protein yiha/ysxc | D0N37_RS01380 | Not Available | Negative | 295870 - 296508 | 23678.8 |
| c-type cytochrome | D0N37_RS01385 | Not Available | Positive | 296961 - 297593 | 22378.9 |
| class i sam-dependent methyltransferase | D0N37_RS01390 | Not Available | Positive | 298230 - 298883 | 24629.6 |
| der gtpase-activating protein yihi | D0N37_RS01395 | Not Available | Positive | 298908 - 299495 | 22328.3 |
| duf2489 domain-containing protein | D0N37_RS01400 | Not Available | Positive | 299495 - 300010 | 19938.0 |
| 4'-phosphopantetheinyl transferase | D0N37_RS01405 | Not Available | Negative | 300169 - 300855 | 25688.8 |
| nadph-dependent fmn reductase | D0N37_RS01410 | Not Available | Negative | 300977 - 301543 | 19875.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.