Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas piscicida |
| Strain | DE1-A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Delaware Bay; Hainan Island; mariculture water; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoalteromonas piscicida strain DE1-A chromosome 1, complete
Gene Summary
Adenine Count
1174966 bp
Thymine Count
1179793 bp
Guanine Count
903423 bp
Cytosine Count
907796 bp
Genome Length
4165978 bp
Protein-coding Genes
3589 genes
Non-Coding Genes
211 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| threonine ammonia-lyase, biosynthetic | D0N37_RS01315 | Not Available | Positive | 279199 - 280740 | 56279.3 |
| hypothetical protein | D0N37_RS01320 | Not Available | Positive | 280798 - 281232 | 16247.2 |
| abc transporter substrate-binding protein | D0N37_RS01325 | Not Available | Positive | 281355 - 282407 | 40411.2 |
| methyltransferase | D0N37_RS01330 | Not Available | Positive | 282435 - 283631 | 45740.6 |
| carbonate dehydratase | D0N37_RS01335 | Not Available | Positive | 283631 - 284299 | 24837.6 |
| ubiquinone biosynthesis accessory factor ubik | D0N37_RS01340 | Not Available | Negative | 284366 - 284635 | 10081.0 |
| dna helicase rep | D0N37_RS01345 | Not Available | Positive | 284830 - 286845 | 77028.4 |
| integrase core domain-containing protein | D0N37_RS01350 | Not Available | Negative | 286831 - 289400 | 92231.1 |
| c-type cytochrome | D0N37_RS01355 | Not Available | Negative | 289622 - 290014 | 13514.0 |
| isoprenoid biosynthesis glyoxalase elbb | D0N37_RS01360 | Not Available | Negative | 290267 - 290917 | 23145.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.