Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas piscicida |
| Strain | DE1-A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Delaware Bay; Hainan Island; mariculture water; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoalteromonas piscicida strain DE1-A chromosome 1, complete
Gene Summary
Adenine Count
1174966 bp
Thymine Count
1179793 bp
Guanine Count
903423 bp
Cytosine Count
907796 bp
Genome Length
4165978 bp
Protein-coding Genes
3589 genes
Non-Coding Genes
211 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| plp-dependent decarboxylase | D0N37_RS01260 | Not Available | Negative | 267252 - 268457 | 44399.9 |
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferase | D0N37_RS01265 | Not Available | Negative | 268457 - 269197 | 25910.9 |
| 4-hydroxy-tetrahydrodipicolinate synthase | D0N37_RS01270 | Not Available | Negative | 269208 - 270092 | 31874.1 |
| response regulator | D0N37_RS01275 | Not Available | Positive | 270543 - 272249 | 63943.7 |
| hypothetical protein | D0N37_RS01280 | Not Available | Negative | 272235 - 272852 | 21837.6 |
| trab/gumn family protein | D0N37_RS01285 | Not Available | Negative | 273002 - 273877 | 33528.7 |
| acetolactate synthase 2 catalytic subunit | D0N37_RS01295 | Not Available | Positive | 274404 - 276065 | 59361.2 |
| acetolactate synthase 2 small subunit | D0N37_RS01300 | Not Available | Positive | 276062 - 276304 | 9233.34 |
| branched-chain amino acid transaminase | D0N37_RS01305 | Not Available | Positive | 276325 - 277248 | 33673.0 |
| dihydroxy-acid dehydratase | D0N37_RS01310 | Not Available | Positive | 277340 - 279196 | 66174.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.