Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas piscicida |
| Strain | DE1-A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Delaware Bay; Hainan Island; mariculture water; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoalteromonas piscicida strain DE1-A chromosome 1, complete
Gene Summary
Adenine Count
1174966 bp
Thymine Count
1179793 bp
Guanine Count
903423 bp
Cytosine Count
907796 bp
Genome Length
4165978 bp
Protein-coding Genes
3589 genes
Non-Coding Genes
211 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pas-domain containing protein | D0N37_RS01165 | Not Available | Positive | 245293 - 248751 | 127084.0 |
| integrase core domain-containing protein | D0N37_RS01170 | Not Available | Negative | 248756 - 249422 | 23953.5 |
| tonb-dependent receptor | D0N37_RS01175 | Not Available | Negative | 249520 - 251802 | 83856.9 |
| gntp family permease | D0N37_RS01180 | Not Available | Positive | 252051 - 253355 | 45926.9 |
| homoserine o-acetyltransferase | D0N37_RS01185 | Not Available | Positive | 253371 - 254549 | 43151.9 |
| 3-hydroxybutyrate dehydrogenase | D0N37_RS01190 | Not Available | Positive | 254563 - 255318 | 26941.8 |
| coa transferase subunit a | D0N37_RS01195 | Not Available | Positive | 255327 - 256031 | 25170.5 |
| 3-oxoacid coa-transferase subunit b | D0N37_RS01200 | Not Available | Positive | 256031 - 256690 | 23286.6 |
| ricin domain-containing protein | D0N37_RS01205 | Not Available | Negative | 256776 - 257393 | 23765.9 |
| lta synthase family protein | D0N37_RS01210 | Not Available | Positive | 257515 - 258834 | 49509.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.