Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas piscicida |
| Strain | DE1-A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Delaware Bay; Hainan Island; mariculture water; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoalteromonas piscicida strain DE1-A chromosome 1, complete
Gene Summary
Adenine Count
1174966 bp
Thymine Count
1179793 bp
Guanine Count
903423 bp
Cytosine Count
907796 bp
Genome Length
4165978 bp
Protein-coding Genes
3589 genes
Non-Coding Genes
211 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l22 | D0N37_RS01110 | Not Available | Positive | 239737 - 240069 | 11958.7 |
| 30s ribosomal protein s3 | D0N37_RS01115 | Not Available | Positive | 240082 - 240783 | 25756.6 |
| 50s ribosomal protein l16 | D0N37_RS01120 | Not Available | Positive | 240797 - 241210 | 15607.3 |
| 50s ribosomal protein l29 | D0N37_RS01125 | Not Available | Positive | 241210 - 241401 | 7176.77 |
| 30s ribosomal protein s17 | D0N37_RS01130 | Not Available | Positive | 241401 - 241658 | 9639.85 |
| 30s ribosomal protein s17 | D0N37_RS01135 | Not Available | Positive | 241745 - 241945 | 7530.33 |
| integrase core domain-containing protein | D0N37_RS01140 | Not Available | Positive | 242032 - 242274 | 9042.24 |
| 30s ribosomal protein s17 | D0N37_RS01145 | Not Available | Positive | 242361 - 242561 | 7530.33 |
| integrase core domain-containing protein | D0N37_RS01150 | Not Available | Positive | 242603 - 242860 | 9675.98 |
| methyl-accepting chemotaxis protein | D0N37_RS01160 | Not Available | Positive | 243243 - 245195 | 71304.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.