Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas piscicida |
| Strain | DE1-A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Delaware Bay; Hainan Island; mariculture water; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoalteromonas piscicida strain DE1-A chromosome 1, complete
Gene Summary
Adenine Count
1174966 bp
Thymine Count
1179793 bp
Guanine Count
903423 bp
Cytosine Count
907796 bp
Genome Length
4165978 bp
Protein-coding Genes
3589 genes
Non-Coding Genes
211 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| elongation factor tu | D0N37_RS01060 | Not Available | Positive | 229071 - 230255 | 43463.0 |
| taxi family trap transporter solute-binding subunit | D0N37_RS01065 | Not Available | Positive | 230596 - 231612 | 35968.5 |
| trap transporter permease | D0N37_RS01070 | Not Available | Positive | 231649 - 233742 | 74750.3 |
| integrase core domain-containing protein | D0N37_RS01075 | Not Available | Negative | 233799 - 236224 | 89053.3 |
| 30s ribosomal protein s10 | D0N37_RS01080 | Not Available | Positive | 236695 - 237006 | 11726.3 |
| integrase core domain-containing protein | D0N37_RS01085 | Not Available | Positive | 237034 - 237668 | 22952.3 |
| 50s ribosomal protein l4 | D0N37_RS01090 | Not Available | Positive | 237686 - 238288 | 21814.4 |
| 50s ribosomal protein l23 | D0N37_RS01095 | Not Available | Positive | 238285 - 238587 | 11167.6 |
| 50s ribosomal protein l2 | D0N37_RS01100 | Not Available | Positive | 238605 - 239429 | 29997.3 |
| 30s ribosomal protein s19 | D0N37_RS01105 | Not Available | Positive | 239446 - 239724 | 10469.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.