Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas piscicida |
| Strain | DE1-A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Delaware Bay; Hainan Island; mariculture water; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoalteromonas piscicida strain DE1-A chromosome 1, complete
Gene Summary
Adenine Count
1174966 bp
Thymine Count
1179793 bp
Guanine Count
903423 bp
Cytosine Count
907796 bp
Genome Length
4165978 bp
Protein-coding Genes
3589 genes
Non-Coding Genes
211 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma d regulator | D0N37_RS01010 | Not Available | Negative | 221596 - 222066 | 17726.6 |
| uroporphyrinogen decarboxylase | D0N37_RS01015 | Not Available | Positive | 222535 - 223599 | 39373.4 |
| m1 family metallopeptidase | D0N37_RS01020 | Not Available | Negative | 223678 - 225522 | 69868.9 |
| udp-n-acetylmuramate dehydrogenase | D0N37_RS01025 | Not Available | Positive | 225706 - 226725 | 37311.6 |
| bifunctional biotin--[acetyl-coa-carboxylase] ligase/biotin operon repressor bira | D0N37_RS01030 | Not Available | Positive | 226712 - 227704 | 36867.4 |
| integrase core domain-containing protein | D0N37_RS01035 | Not Available | Positive | 227701 - 228392 | 25089.6 |
| Trna-thr | Not Available | Not Available | Positive | 228517 - 228592 | Not Available |
| Trna-tyr | Not Available | Not Available | Positive | 228641 - 228725 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 228770 - 228844 | Not Available |
| Trna-thr | Not Available | Not Available | Positive | 228858 - 228933 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.