Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas piscicida |
| Strain | DE1-A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Delaware Bay; Hainan Island; mariculture water; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoalteromonas piscicida strain DE1-A chromosome 1, complete
Gene Summary
Adenine Count
1174966 bp
Thymine Count
1179793 bp
Guanine Count
903423 bp
Cytosine Count
907796 bp
Genome Length
4165978 bp
Protein-coding Genes
3589 genes
Non-Coding Genes
211 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lytr/algr family response regulator transcription factor | D0N37_RS00965 | Not Available | Positive | 213965 - 214693 | 26980.9 |
| yheu family protein | D0N37_RS00970 | Not Available | Negative | 214697 - 214954 | 9761.37 |
| integrase core domain-containing protein | D0N37_RS00975 | Not Available | Negative | 214957 - 215963 | 37445.8 |
| hypothetical protein | D0N37_RS24375 | Not Available | Negative | 216211 - 216357 | 5727.1 |
| tigr02444 family protein | D0N37_RS00980 | Not Available | Negative | 216553 - 217002 | 17203.7 |
| atp-binding cassette domain-containing protein | D0N37_RS00985 | Not Available | Negative | 216996 - 218924 | 72120.8 |
| yhev family putative zinc ribbon protein | D0N37_RS00990 | Not Available | Positive | 219055 - 219255 | 7516.23 |
| slyx family protein | D0N37_RS00995 | Not Available | Negative | 219276 - 219488 | 8247.93 |
| wd40 repeat domain-containing protein | D0N37_RS01000 | Not Available | Negative | 219485 - 220447 | 35442.5 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | D0N37_RS01005 | Not Available | Positive | 220767 - 221519 | 27193.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.