Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas piscicida |
| Strain | DE1-A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Delaware Bay; Hainan Island; mariculture water; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoalteromonas piscicida strain DE1-A chromosome 1, complete
Gene Summary
Adenine Count
1174966 bp
Thymine Count
1179793 bp
Guanine Count
903423 bp
Cytosine Count
907796 bp
Genome Length
4165978 bp
Protein-coding Genes
3589 genes
Non-Coding Genes
211 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adp compounds hydrolase nude | D0N37_RS00915 | Not Available | Positive | 206657 - 207220 | 20661.8 |
| 3'(2'),5'-bisphosphate nucleotidase cysq | D0N37_RS00920 | Not Available | Positive | 207222 - 208025 | 29600.9 |
| Trna-met | Not Available | Not Available | Positive | 208266 - 208342 | Not Available |
| Trna-met | Not Available | Not Available | Positive | 208613 - 208689 | Not Available |
| Trna-met | Not Available | Not Available | Positive | 208749 - 208825 | Not Available |
| methyl-accepting chemotaxis protein | D0N37_RS00940 | Not Available | Positive | 209140 - 210729 | 57972.4 |
| dipeptidase | D0N37_RS00945 | Not Available | Negative | 210791 - 211975 | 43731.9 |
| hypothetical protein | D0N37_RS00950 | Not Available | Positive | 212153 - 212794 | 23648.8 |
| hypothetical protein | D0N37_RS00955 | Not Available | Positive | 212912 - 213286 | 14080.7 |
| sensor histidine kinase | D0N37_RS00960 | Not Available | Positive | 213382 - 213987 | 22787.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.