Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas piscicida |
| Strain | DE1-A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Delaware Bay; Hainan Island; mariculture water; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoalteromonas piscicida strain DE1-A chromosome 1, complete
Gene Summary
Adenine Count
1174966 bp
Thymine Count
1179793 bp
Guanine Count
903423 bp
Cytosine Count
907796 bp
Genome Length
4165978 bp
Protein-coding Genes
3589 genes
Non-Coding Genes
211 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf799 domain-containing protein | D0N37_RS00865 | Not Available | Positive | 197873 - 198529 | 23431.8 |
| hypothetical protein | D0N37_RS00870 | Not Available | Negative | 198534 - 199319 | 29501.7 |
| integrase core domain-containing protein | D0N37_RS00875 | Not Available | Positive | 199404 - 200203 | 29016.4 |
| transporter substrate-binding domain-containing protein | D0N37_RS00880 | Not Available | Negative | 200200 - 200859 | 24731.0 |
| sdr family oxidoreductase | D0N37_RS00885 | Not Available | Positive | 201085 - 201750 | 23619.3 |
| hypothetical protein | D0N37_RS00890 | Not Available | Positive | 201837 - 202208 | 13688.0 |
| fatty acid cis/trans isomerase | D0N37_RS00895 | Not Available | Positive | 202209 - 204542 | 88846.6 |
| peroxiredoxin-like family protein | D0N37_RS00900 | Not Available | Negative | 204581 - 205207 | 22547.4 |
| dutp diphosphatase | D0N37_RS00905 | Not Available | Positive | 205322 - 205942 | 23931.3 |
| gmp/imp nucleotidase | D0N37_RS00910 | Not Available | Negative | 205939 - 206595 | 25246.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.