Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas piscicida |
| Strain | DE1-A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Delaware Bay; Hainan Island; mariculture water; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoalteromonas piscicida strain DE1-A chromosome 1, complete
Gene Summary
Adenine Count
1174966 bp
Thymine Count
1179793 bp
Guanine Count
903423 bp
Cytosine Count
907796 bp
Genome Length
4165978 bp
Protein-coding Genes
3589 genes
Non-Coding Genes
211 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | D0N37_RS00715 | Not Available | Positive | 158951 - 160729 | 65994.9 |
| ompa family protein | D0N37_RS00720 | Not Available | Positive | 160881 - 161930 | 38051.2 |
| bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase | D0N37_RS00725 | Not Available | Positive | 162241 - 164838 | 93637.2 |
| 2og-fe dioxygenase family protein | D0N37_RS00730 | Not Available | Positive | 165084 - 165716 | 23782.1 |
| cysteine desulfurase-like protein | D0N37_RS00735 | Not Available | Positive | 165726 - 166964 | 45276.7 |
| cyclic nucleotide-binding domain-containing protein | D0N37_RS00740 | Not Available | Negative | 166995 - 167456 | 17557.4 |
| tetratricopeptide repeat protein | D0N37_RS00745 | Not Available | Negative | 167581 - 168606 | 38754.7 |
| nitrogen regulation protein nr(i) | D0N37_RS00750 | Not Available | Negative | 168752 - 170149 | 51815.2 |
| nitrogen regulation protein nr(ii) | D0N37_RS00755 | Not Available | Negative | 170146 - 171228 | 40732.8 |
| hypothetical protein | D0N37_RS24550 | Not Available | Positive | 171486 - 171668 | 6853.11 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.